HL_8FRU_034
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CGGCGCCCCGG
- Length
- 11 nucleotides
- Bulged bases
- 8FRU|1|1|C|1351, 8FRU|1|1|G|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FRU_034 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.097
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
8FRU|1|1|C|1343
8FRU|1|1|G|1344
8FRU|1|1|G|1345
8FRU|1|1|C|1346
8FRU|1|1|G|1347
8FRU|1|1|C|1348
8FRU|1|1|C|1349
8FRU|1|1|C|1350
8FRU|1|1|C|1351
8FRU|1|1|G|1352
8FRU|1|1|G|1353
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain R
- 60S ribosomal protein eL19
- Chain U
- 60S ribosomal protein eL22
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