HL_8FRU_049

3D structure

PDB id

8FRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S subunit of the Giardia lamblia 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GGUCGCGC

Length

8 nucleotides

Bulged bases

8FRU|1|1|C|2006

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FRU|1|1|G|2003
8FRU|1|1|G|2004
8FRU|1|1|U|2005
8FRU|1|1|C|2006
8FRU|1|1|G|2007
8FRU|1|1|C|2008
8FRU|1|1|G|2009
8FRU|1|1|C|2010

Current chains

Chain 1

28S rRNA

Nearby chains

Chain A

60S ribosomal protein uL2

Chain G

60S ribosomal protein eL8

Chain X

60S ribosomal protein uL23