HL_8FRU_054

3D structure

PDB id

8FRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S subunit of the Giardia lamblia 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CCCCCGUGCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FRU|1|1|C|2145
8FRU|1|1|C|2146
8FRU|1|1|C|2147
8FRU|1|1|C|2148
8FRU|1|1|C|2149
8FRU|1|1|G|2150
8FRU|1|1|U|2151
8FRU|1|1|G|2152
8FRU|1|1|C|2153
8FRU|1|1|C|2154
8FRU|1|1|G|2155

Current chains

Chain 1

28S rRNA

Nearby chains

Chain Q

60S ribosomal protein eL18

Chain T

60S ribosomal protein eL21

Chain a

60S ribosomal protein uL15

Chain o

60S ribosomal protein eL42