HL_8FRU_063
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CUGACCGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8FRU|1|1|G|2530, 8FRU|1|1|C|2534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FRU_063 not in the Motif Atlas
- Homologous match to HL_8C3A_068
- Geometric discrepancy: 0.1612
- The information below is about HL_8C3A_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
8FRU|1|1|C|2524
8FRU|1|1|U|2525
8FRU|1|1|G|2526
8FRU|1|1|A|2527
8FRU|1|1|C|2528
8FRU|1|1|C|2529
8FRU|1|1|G|2530
8FRU|1|1|C|2531
8FRU|1|1|C|2532
8FRU|1|1|U|2533
8FRU|1|1|C|2534
8FRU|1|1|U|2535
8FRU|1|1|A|2536
8FRU|1|1|A|2537
8FRU|1|1|G|2538
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein uL6
- Chain O
- 60S ribosomal protein uL13
- Chain m
- 60S ribosomal protein eL40
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