HL_8FRU_070
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CCCGCCCG
- Length
- 8 nucleotides
- Bulged bases
- 8FRU|1|4|C|75
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FRU_070 not in the Motif Atlas
- Geometric match to HL_7RQB_011
- Geometric discrepancy: 0.1724
- The information below is about HL_7RQB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70546.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
8FRU|1|4|C|73
8FRU|1|4|C|74
8FRU|1|4|C|75
8FRU|1|4|G|76
8FRU|1|4|C|77
8FRU|1|4|C|78
8FRU|1|4|C|79
8FRU|1|4|G|80
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein uL24
- Chain h
- 60S ribosomal protein uL29
- Chain l
- 60S ribosomal protein eL39
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