3D structure

PDB id
8FZA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Class I type III preQ1 riboswitch from E. coli
Experimental method
X-RAY DIFFRACTION
Resolution
2.3 Å

Loop

Sequence
GUUCCCUCACC
Length
11 nucleotides
Bulged bases (A, C, G, U)
12C
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_45785.1
Basepair signature
cWW-F-F-F-F-cSH-F-F
Number of instances in this motif group
2

Unit IDs

8FZA|1|A|G|5
8FZA|1|A|U|6
8FZA|1|A|U|7
8FZA|1|A|C|8
8FZA|1|A|C|9
8FZA|1|A|C|10
8FZA|1|A|U|11
8FZA|1|A|C|12
8FZA|1|A|A|13
8FZA|1|A|C|14
8FZA|1|A|C|15

Current chains

Chain A
PreQ1 Riboswitch (30-MER)

Nearby chains

Chain B
PreQ1 Riboswitch (30-MER)

Coloring options:

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