Motif HL_51121.1 Version HL_51121.1 of this group appears in releases 4.1 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 4-6 | 7-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8FZA_002 | 8FZA | 0.0000 | 0 | B | PreQ1 Riboswitch (30-MER) | G | 5 | U | 6 | U | 7 | C | 8 | C | 9 | C | 10 | U | 11 | C | 12 | A | 13 | C | 14 | C | 15 | cWW | cSH | ncSH |
| 2 | HL_8FZA_001 | 8FZA | 0.6804 | 0 | A | PreQ1 Riboswitch (30-MER) | G | 5 | U | 6 | U | 7 | C | 8 | C | 9 | C | 10 | U | 11 | C | 12 | A | 13 | C | 14 | C | 15 | cWW | cSH | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUCCCUCACC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCCCUCAC | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-cSH-F-F-F
- Heat map statistics
- Min 0.68 | Avg 0.34 | Max 0.68
Coloring options: