HL_8FZE_053

3D structure

PDB id

8FZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8FZE|1|A|A|2268, 8FZE|1|A|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZE_053 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0942

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8FZE|1|A|C|2264
8FZE|1|A|U|2265
8FZE|1|A|A|2266
8FZE|1|A|A|2267
8FZE|1|A|A|2268
8FZE|1|A|G|2269
8FZE|1|A|A|2270
8FZE|1|A|G|2271
8FZE|1|A|U|2272
8FZE|1|A|A|2273
8FZE|1|A|A|2274
8FZE|1|A|C|2275
8FZE|1|A|G|2276

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27