3D structure

PDB id
8FZE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8FZE_057 not in the Motif Atlas
Homologous match to HL_5J7L_191
Geometric discrepancy: 0.0794
The information below is about HL_5J7L_191
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

8FZE|1|A|C|2374
8FZE|1|A|G|2375
8FZE|1|A|A|2376
8FZE|1|A|A|2377
8FZE|1|A|A|2378
8FZE|1|A|G|2379

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 5
50S ribosomal protein L33
Chain Q
50S ribosomal protein L18

Coloring options:


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