HL_8FZF_050

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

8FZF|1|A|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZF_050 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.4373

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

8FZF|1|A|C|2143
8FZF|1|A|G|2144
8FZF|1|A|C|2145
8FZF|1|A|C|2146
8FZF|1|A|A|2147
8FZF|1|A|G|2148

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7