HL_8FZG_016

3D structure

PDB id

8FZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8FZG|1|A|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZG_016 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.2678

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

8FZG|1|A|C|544
8FZG|1|A|U|545
8FZG|1|A|U|546
8FZG|1|A|A|547
8FZG|1|A|G|548
8FZG|1|A|G|549

Current chains

Chain A

23S Ribosomal RNA

Nearby chains