HL_8FZG_021
3D structure
- PDB id
- 8FZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGUAACACU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FZG_021 not in the Motif Atlas
- Geometric match to HL_6CF2_001
- Geometric discrepancy: 0.3985
- The information below is about HL_6CF2_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87553.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8FZG|1|A|G|711
8FZG|1|A|G|712
8FZG|1|A|G|713
8FZG|1|A|U|714
8FZG|1|A|A|715
8FZG|1|A|A|716
8FZG|1|A|C|717
8FZG|1|A|A|718
8FZG|1|A|C|719
8FZG|1|A|U|720
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain o
- 30S ribosomal protein S15
Coloring options: