HL_8FZG_042

3D structure

PDB id

8FZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8FZG|1|A|U|1729, 8FZG|1|A|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZG_042 not in the Motif Atlas

Geometric match to HL_6VMY_004

Geometric discrepancy: 0.3426

The information below is about HL_6VMY_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

8FZG|1|A|C|1727
8FZG|1|A|C|1728
8FZG|1|A|U|1729
8FZG|1|A|C|1730
8FZG|1|A|G|1731
8FZG|1|A|C|1732
8FZG|1|A|G|1733

Current chains

Chain A

23S Ribosomal RNA

Nearby chains