HL_8FZG_094

3D structure

PDB id

8FZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8FZG|1|a|C|1136, 8FZG|1|a|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZG_094 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.2999

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8FZG|1|a|G|1134
8FZG|1|a|U|1135
8FZG|1|a|C|1136
8FZG|1|a|C|1137
8FZG|1|a|G|1138
8FZG|1|a|G|1139
8FZG|1|a|C|1140

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9