HL_8FZJ_075

3D structure

PDB id

8FZJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8FZJ|1|a|U|209, 8FZJ|1|a|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZJ_075 not in the Motif Atlas

Geometric match to HL_8C3A_196

Geometric discrepancy: 0.3186

The information below is about HL_8C3A_196

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

8FZJ|1|a|C|207
8FZJ|1|a|U|208
8FZJ|1|a|U|209
8FZJ|1|a|C|210
8FZJ|1|a|G|211
8FZJ|1|a|G|212

Current chains

Chain a

16S Ribosomal RNA

Nearby chains