HL_8G2U_024

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

8G2U|1|B|U|747, 8G2U|1|B|A|751, 8G2U|1|B|A|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_024 not in the Motif Atlas

Homologous match to HL_7A0S_022

Geometric discrepancy: 0.1085

The information below is about HL_7A0S_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

8G2U|1|B|U|744
8G2U|1|B|G|745
8G2U|1|B|U|746
8G2U|1|B|U|747
8G2U|1|B|G|748
8G2U|1|B|A|749
8G2U|1|B|A|750
8G2U|1|B|A|751
8G2U|1|B|A|752
8G2U|1|B|A|753

Current chains

Chain B

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain 2

50S ribosomal protein L34

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22