HL_8G2U_025

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

8G2U|1|B|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_025 not in the Motif Atlas

Homologous match to HL_4WF9_024

Geometric discrepancy: 0.5269

The information below is about HL_4WF9_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8G2U|1|B|U|779
8G2U|1|B|G|780
8G2U|1|B|A|781
8G2U|1|B|A|782
8G2U|1|B|A|783
8G2U|1|B|G|784
8G2U|1|B|G|785

Current chains

Chain B

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2