HL_8G2U_038

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCGACGGUUGUC

Length

12 nucleotides

Bulged bases

8G2U|1|B|A|1453, 8G2U|1|B|C|1454, 8G2U|1|B|G|1459, 8G2U|1|B|U|1460

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_038 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.3117

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

8G2U|1|B|G|1450
8G2U|1|B|C|1451
8G2U|1|B|G|1452
8G2U|1|B|A|1453
8G2U|1|B|C|1454
8G2U|1|B|G|1455
8G2U|1|B|G|1456
8G2U|1|B|U|1457
8G2U|1|B|U|1458
8G2U|1|B|G|1459
8G2U|1|B|U|1460
8G2U|1|B|C|1461

Current chains

Chain B

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17