HL_8G2U_042

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

8G2U|1|B|A|1614, 8G2U|1|B|A|1616, 8G2U|1|B|A|1618

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_042 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.0534

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

8G2U|1|B|C|1612
8G2U|1|B|G|1613
8G2U|1|B|A|1614
8G2U|1|B|C|1615
8G2U|1|B|A|1616
8G2U|1|B|C|1617
8G2U|1|B|A|1618
8G2U|1|B|G|1619

Current chains

Chain B

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain S

50S ribosomal protein L22