HL_8G2U_058

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

8G2U|1|B|U|2305, 8G2U|1|B|C|2306

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_058 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.5729

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8G2U|1|B|G|2303
8G2U|1|B|G|2304
8G2U|1|B|U|2305
8G2U|1|B|C|2306
8G2U|1|B|G|2307
8G2U|1|B|G|2308
8G2U|1|B|A|2309
8G2U|1|B|C|2310
8G2U|1|B|A|2311
8G2U|1|B|U|2312
8G2U|1|B|C|2313

Current chains

Chain B

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5