HL_8G31_005

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

8G31|1|B|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G31_005 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1746

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8G31|1|B|G|123
8G31|1|B|G|124
8G31|1|B|A|125
8G31|1|B|A|126
8G31|1|B|A|127
8G31|1|B|C|128

Current chains

Chain B

23S

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23