HL_8G31_006

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

8G31|1|B|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G31_006 not in the Motif Atlas

Geometric match to HL_3U4M_001

Geometric discrepancy: 0.2461

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8G31|1|B|U|137
8G31|1|B|U|138
8G31|1|B|U|139
8G31|1|B|C|140
8G31|1|B|G|141
8G31|1|B|A|142

Current chains

Chain B

23S

Nearby chains

Chain T

50S ribosomal protein L23