3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGUAAGUUC
Length
9 nucleotides
Bulged bases
8G31|1|B|U|1955
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8G31_051 not in the Motif Atlas
Homologous match to HL_7RQB_049
Geometric discrepancy: 0.2156
The information below is about HL_7RQB_049
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_51824.1
Basepair signature
cWW-F-F-tSH-F-F
Number of instances in this motif group
8

Unit IDs

8G31|1|B|G|1949
8G31|1|B|G|1950
8G31|1|B|U|1951
8G31|1|B|A|1952
8G31|1|B|A|1953
8G31|1|B|G|1954
8G31|1|B|U|1955
8G31|1|B|U|1956
8G31|1|B|C|1957

Current chains

Chain B
23S

Nearby chains

Chain 6
GTPase HflX
Chain K
50S ribosomal protein L14
Chain v
Small subunit ribosomal RNA; SSU rRNA

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