HL_8G31_053

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACC

Length

53 nucleotides

Bulged bases

8G31|1|B|U|2131, 8G31|1|B|U|2132, 8G31|1|B|G|2133, 8G31|1|B|G|2136, 8G31|1|B|C|2143, 8G31|1|B|G|2144, 8G31|1|B|C|2146, 8G31|1|B|A|2147, 8G31|1|B|U|2149, 8G31|1|B|C|2153, 8G31|1|B|G|2157, 8G31|1|B|C|2160, 8G31|1|B|C|2164, 8G31|1|B|U|2167, 8G31|1|B|A|2169, 8G31|1|B|A|2170, 8G31|1|B|C|2174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G31|1|B|G|2123
8G31|1|B|G|2124
8G31|1|B|G|2125
8G31|1|B|A|2126
8G31|1|B|G|2127
8G31|1|B|G|2128
8G31|1|B|C|2129
8G31|1|B|U|2130
8G31|1|B|U|2131
8G31|1|B|U|2132
8G31|1|B|G|2133
8G31|1|B|A|2134
8G31|1|B|A|2135
8G31|1|B|G|2136
8G31|1|B|U|2137
8G31|1|B|G|2138
8G31|1|B|U|2139
8G31|1|B|G|2140
8G31|1|B|G|2141
8G31|1|B|A|2142
8G31|1|B|C|2143
8G31|1|B|G|2144
8G31|1|B|C|2145
8G31|1|B|C|2146
8G31|1|B|A|2147
8G31|1|B|G|2148
8G31|1|B|U|2149
8G31|1|B|C|2150
8G31|1|B|U|2151
8G31|1|B|G|2152
8G31|1|B|C|2153
8G31|1|B|A|2154
8G31|1|B|U|2155
8G31|1|B|G|2156
8G31|1|B|G|2157
8G31|1|B|A|2158
8G31|1|B|G|2159
8G31|1|B|C|2160
8G31|1|B|C|2161
8G31|1|B|G|2162
8G31|1|B|A|2163
8G31|1|B|C|2164
8G31|1|B|C|2165
8G31|1|B|U|2166
8G31|1|B|U|2167
8G31|1|B|G|2168
8G31|1|B|A|2169
8G31|1|B|A|2170
8G31|1|B|A|2171
8G31|1|B|U|2172
8G31|1|B|A|2173
8G31|1|B|C|2174
8G31|1|B|C|2175

Current chains

Chain B

23S

Nearby chains