HL_8G31_080

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

8G31|1|v|G|346

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G31_080 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.2884

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8G31|1|v|C|341
8G31|1|v|C|342
8G31|1|v|U|343
8G31|1|v|A|344
8G31|1|v|C|345
8G31|1|v|G|346
8G31|1|v|G|347
8G31|1|v|G|348

Current chains

Chain v

16S

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19