HL_8G31_097

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

8G31|1|v|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G31_097 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.2542

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8G31|1|v|U|1165
8G31|1|v|G|1166
8G31|1|v|A|1167
8G31|1|v|U|1168
8G31|1|v|A|1169
8G31|1|v|A|1170
8G31|1|v|A|1171

Current chains

Chain v

16S

Nearby chains

Chain w

30S ribosomal protein S2