HL_8G34_068

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8G34|1|B|G|2751, 8G34|1|B|C|2755

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_068 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1051

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8G34|1|B|C|2745
8G34|1|B|U|2746
8G34|1|B|G|2747
8G34|1|B|A|2748
8G34|1|B|A|2749
8G34|1|B|A|2750
8G34|1|B|G|2751
8G34|1|B|C|2752
8G34|1|B|A|2753
8G34|1|B|U|2754
8G34|1|B|C|2755
8G34|1|B|U|2756
8G34|1|B|A|2757
8G34|1|B|A|2758
8G34|1|B|G|2759

Current chains

Chain B

23S

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13