HL_8G38_032

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

8G38|1|B|U|1173, 8G38|1|B|U|1174, 8G38|1|B|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_032 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1261

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8G38|1|B|G|1171
8G38|1|B|C|1172
8G38|1|B|U|1173
8G38|1|B|U|1174
8G38|1|B|A|1175
8G38|1|B|U|1176
8G38|1|B|G|1177
8G38|1|B|C|1178

Current chains

Chain B

23S

Nearby chains

Chain L

50S ribosomal protein L15