HL_8G38_061

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

8G38|1|B|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_061 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.1032

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8G38|1|B|U|2404
8G38|1|B|G|2405
8G38|1|B|A|2406
8G38|1|B|A|2407
8G38|1|B|U|2408
8G38|1|B|G|2409
8G38|1|B|G|2410
8G38|1|B|A|2411
8G38|1|B|A|2412
8G38|1|B|G|2413

Current chains

Chain B

23S

Nearby chains

Chain L

50S ribosomal protein L15