HL_8G38_077
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 8G38|1|v|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G38_077 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.1163
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8G38|1|v|G|259
8G38|1|v|G|260
8G38|1|v|U|261
8G38|1|v|A|262
8G38|1|v|A|263
8G38|1|v|C|264
8G38|1|v|G|265
8G38|1|v|G|266
8G38|1|v|C|267
Current chains
- Chain v
- 16S
Nearby chains
- Chain p
- 30S ribosomal protein S17
- Chain s
- 30S ribosomal protein S20
Coloring options: