HL_8G60_004
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 8G60|1|L5|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G60_004 not in the Motif Atlas
- Geometric match to HL_5TBW_001
- Geometric discrepancy: 0.0873
- The information below is about HL_5TBW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36430.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8G60|1|L5|U|37
8G60|1|L5|A|38
8G60|1|L5|A|39
8G60|1|L5|G|40
8G60|1|L5|C|41
8G60|1|L5|A|42
8G60|1|L5|U|43
8G60|1|L5|A|44
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- eL13
- Chain LN
- eL15
- Chain La
- uL15
- Chain Lo
- eL42
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