HL_8G60_050

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GGGUAGC

Length

7 nucleotides

Bulged bases

8G60|1|L5|G|2903

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G60_050 not in the Motif Atlas

Homologous match to HL_8C3A_044

Geometric discrepancy: 0.5789

The information below is about HL_8C3A_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28980.2

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

8G60|1|L5|G|2901
8G60|1|L5|G|2902
8G60|1|L5|G|2903
8G60|1|L5|U|3595
8G60|1|L5|A|3596
8G60|1|L5|G|3597
8G60|1|L5|C|3598

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

eL19

Chain SI

eS8

Chain SL

uS17