HL_8G60_074

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CCCGCCGG

Length

8 nucleotides

Bulged bases

8G60|1|L5|C|4858

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G60_074 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2589

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8G60|1|L5|C|4773
8G60|1|L5|C|4774
8G60|1|L5|C|4775
8G60|1|L5|G|4776
8G60|1|L5|C|4858
8G60|1|L5|C|4859
8G60|1|L5|G|4860
8G60|1|L5|G|4861

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

eL14

Chain LO

uL13