HL_8G60_089
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GUA(A2M)UUC
- Length
- 7 nucleotides
- Bulged bases
- 8G60|1|S2|A|158, 8G60|1|S2|U|161
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G60_089 not in the Motif Atlas
- Homologous match to HL_4V88_188
- Geometric discrepancy: 0.1512
- The information below is about HL_4V88_188
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8G60|1|S2|G|156
8G60|1|S2|U|157
8G60|1|S2|A|158
8G60|1|S2|A2M|159
8G60|1|S2|U|160
8G60|1|S2|U|161
8G60|1|S2|C|162
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain EF
- eEF1A
- Chain SG
- eS6
- Chain SY
- eS24
Coloring options: