HL_8G61_059

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

GGGAGGCCCGGGCCGCCGGUGAAAUACC

Length

28 nucleotides

Bulged bases

8G61|1|L5|A|3972, 8G61|1|L5|G|4035

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|L5|G|3969
8G61|1|L5|G|3970
8G61|1|L5|G|3971
8G61|1|L5|A|3972
8G61|1|L5|G|3973
8G61|1|L5|G|3974
8G61|1|L5|C|3975
8G61|1|L5|C|3976
8G61|1|L5|C|3977
8G61|1|L5|G|4034
8G61|1|L5|G|4035
8G61|1|L5|G|4036
8G61|1|L5|C|4037
8G61|1|L5|C|4038
8G61|1|L5|G|4039
8G61|1|L5|C|4040
8G61|1|L5|C|4041
8G61|1|L5|G|4042
8G61|1|L5|G|4043
8G61|1|L5|U|4044
8G61|1|L5|G|4045
8G61|1|L5|A|4046
8G61|1|L5|A|4047
8G61|1|L5|A|4048
8G61|1|L5|U|4049
8G61|1|L5|A|4050
8G61|1|L5|C|4051
8G61|1|L5|C|4052

Current chains

Chain L5

28S rRNA

Nearby chains

Chain 5A

eIF5A1

Chain Lz

60S ribosomal protein L10a

Chain SF

40S ribosomal protein S5