HL_8G61_073

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G61_073 not in the Motif Atlas

Homologous match to HL_8C3A_066

Geometric discrepancy: 0.0758

The information below is about HL_8C3A_066

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8G61|1|L5|C|4603
8G61|1|L5|G|4604
8G61|1|L5|A|4605
8G61|1|L5|G|4606
8G61|1|L5|A|4607
8G61|1|L5|G|4608

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L9

Chain Lm

eL40