HL_8G6J_033
3D structure
- PDB id
- 8G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 8G6J|1|L5|A|1984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G6J_033 not in the Motif Atlas
- Homologous match to HL_8C3A_027
- Geometric discrepancy: 0.226
- The information below is about HL_8C3A_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19210.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8G6J|1|L5|C|1978
8G6J|1|L5|A|1979
8G6J|1|L5|U|1980
8G6J|1|L5|G|1981
8G6J|1|L5|G|1982
8G6J|1|L5|A|1983
8G6J|1|L5|A|1984
8G6J|1|L5|G|1985
8G6J|1|L5|U|1986
8G6J|1|L5|C|1987
8G6J|1|L5|G|1988
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain At
- Transfer RNA; tRNA
- Chain LI
- 60S ribosomal protein L10
- Chain LK
- 60S ribosomal protein L12
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