HL_8G6X_003
3D structure
- PDB id
- 8G6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.31 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8G6X|1|Y|C|56
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G6X_003 not in the Motif Atlas
- Geometric match to HL_8C3A_039
- Geometric discrepancy: 0.2919
- The information below is about HL_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
8G6X|1|Y|G|53
8G6X|1|Y|U|54
8G6X|1|Y|U|55
8G6X|1|Y|C|56
8G6X|1|Y|G|57
8G6X|1|Y|A|58
8G6X|1|Y|U|59
8G6X|1|Y|U|60
8G6X|1|Y|C|61
Current chains
- Chain Y
- A-site tRNA Phe
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 50S ribosomal protein L16
Coloring options: