HL_8G7Q_016

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8G7Q|1|A|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_016 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3107

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

8G7Q|1|A|C|544
8G7Q|1|A|U|545
8G7Q|1|A|U|546
8G7Q|1|A|A|547
8G7Q|1|A|G|548
8G7Q|1|A|G|549

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain T

Ribosomal protein L21