HL_8G7Q_077

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

8G7Q|1|a|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_077 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1638

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8G7Q|1|a|G|259
8G7Q|1|a|G|260
8G7Q|1|a|U|261
8G7Q|1|a|A|262
8G7Q|1|a|A|263
8G7Q|1|a|C|264
8G7Q|1|a|G|265
8G7Q|1|a|G|266
8G7Q|1|a|C|267

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20