HL_8G7S_016

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8G7S|1|A|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_016 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3272

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8G7S|1|A|C|544
8G7S|1|A|U|545
8G7S|1|A|U|546
8G7S|1|A|A|547
8G7S|1|A|G|548
8G7S|1|A|G|549

Current chains

Chain A

23S Ribosomal RNA

Nearby chains