HL_8G7S_053

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8G7S|1|A|A|2268, 8G7S|1|A|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_053 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0898

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8G7S|1|A|C|2264
8G7S|1|A|U|2265
8G7S|1|A|A|2266
8G7S|1|A|A|2267
8G7S|1|A|A|2268
8G7S|1|A|G|2269
8G7S|1|A|A|2270
8G7S|1|A|G|2271
8G7S|1|A|U|2272
8G7S|1|A|A|2273
8G7S|1|A|A|2274
8G7S|1|A|C|2275
8G7S|1|A|G|2276

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27