HL_8G7S_065

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8G7S|1|A|G|2751, 8G7S|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_065 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1093

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8G7S|1|A|C|2745
8G7S|1|A|U|2746
8G7S|1|A|G|2747
8G7S|1|A|A|2748
8G7S|1|A|A|2749
8G7S|1|A|A|2750
8G7S|1|A|G|2751
8G7S|1|A|C|2752
8G7S|1|A|A|2753
8G7S|1|A|U|2754
8G7S|1|A|C|2755
8G7S|1|A|U|2756
8G7S|1|A|A|2757
8G7S|1|A|A|2758
8G7S|1|A|G|2759

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain L

50S ribosomal protein L13