HL_8GHU_020

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGAGAUG

Length

8 nucleotides

Bulged bases

8GHU|1|a|A|1014

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8GHU_020 not in the Motif Atlas

Homologous match to HL_6CZR_093

Geometric discrepancy: 0.5494

The information below is about HL_6CZR_093

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|C|1011
8GHU|1|a|A|1012
8GHU|1|a|G|1013
8GHU|1|a|A|1014
8GHU|1|a|G|1015
8GHU|1|a|A|1016
8GHU|1|a|U|1017
8GHU|1|a|G|1018

Current chains

Chain a

16S rRNA

Nearby chains