HL_8GHU_037

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGCCCUUGAGGCG

Length

13 nucleotides

Bulged bases

8GHU|1|a|C|841, 8GHU|1|a|U|842, 8GHU|1|a|U|843, 8GHU|1|a|G|844, 8GHU|1|a|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|U|837
8GHU|1|a|G|838
8GHU|1|a|C|839
8GHU|1|a|C|840
8GHU|1|a|C|841
8GHU|1|a|U|842
8GHU|1|a|U|843
8GHU|1|a|G|844
8GHU|1|a|A|845
8GHU|1|a|G|846
8GHU|1|a|G|847
8GHU|1|a|C|848
8GHU|1|a|G|849

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S18