HL_8HL2_015

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGGCGAAAUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|655
8HL2|1|A16S|G|656
8HL2|1|A16S|G|657
8HL2|1|A16S|C|658
8HL2|1|A16S|G|659
8HL2|1|A16S|A|660
8HL2|1|A16S|A|661
8HL2|1|A16S|A|662
8HL2|1|A16S|U|663
8HL2|1|A16S|C|664

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AMRN

mRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')

Chain S11P

30S ribosomal protein S11