HL_8HL2_021

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAGUCAACGC

Length

10 nucleotides

Bulged bases

8HL2|1|A16S|U|937, 8HL2|1|A16S|G|942

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|934
8HL2|1|A16S|A|935
8HL2|1|A16S|G|936
8HL2|1|A16S|U|937
8HL2|1|A16S|C|938
8HL2|1|A16S|A|939
8HL2|1|A16S|A|940
8HL2|1|A16S|C|941
8HL2|1|A16S|G|942
8HL2|1|A16S|C|943

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain APTN

Transfer RNA; tRNA

Chain AS9P

30S ribosomal protein S9

Chain S10P

30S ribosomal protein S10

Chain S13P

30S ribosomal protein S13