HL_8HL2_022

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GCUAACGAC

Length

9 nucleotides

Bulged bases

8HL2|1|A16S|A|986, 8HL2|1|A16S|G|989

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|983
8HL2|1|A16S|C|984
8HL2|1|A16S|U|985
8HL2|1|A16S|A|986
8HL2|1|A16S|A|987
8HL2|1|A16S|C|988
8HL2|1|A16S|G|989
8HL2|1|A16S|A|990
8HL2|1|A16S|C|991

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain S14P

30S ribosomal protein S14 type Z

Chain S19P

30S ribosomal protein S19

Chain S27A

30S ribosomal protein S27ae