HL_8HL2_066

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGGUUAACAUUCCC

Length

14 nucleotides

Bulged bases

8HL2|1|A23S|U|1542, 8HL2|1|A23S|U|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A23S|G|1533
8HL2|1|A23S|G|1534
8HL2|1|A23S|G|1535
8HL2|1|A23S|U|1536
8HL2|1|A23S|U|1537
8HL2|1|A23S|A|1538
8HL2|1|A23S|A|1539
8HL2|1|A23S|C|1540
8HL2|1|A23S|A|1541
8HL2|1|A23S|U|1542
8HL2|1|A23S|U|1543
8HL2|1|A23S|C|1544
8HL2|1|A23S|C|1545
8HL2|1|A23S|C|1546

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain L19E

50S ribosomal protein L19e

Chain L23P

50S ribosomal protein L23

Chain L34E

50S ribosomal protein L34e