HL_8HSP_053

3D structure

PDB id

8HSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8HSP|1|a|U|545, 8HSP|1|a|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HSP_053 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.2292

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

8HSP|1|a|C|544
8HSP|1|a|U|545
8HSP|1|a|U|546
8HSP|1|a|A|547
8HSP|1|a|G|548
8HSP|1|a|G|549

Current chains

Chain a

23S rRNA

Nearby chains

Chain i

50S ribosomal protein L13

Chain q

50S ribosomal protein L21